other:
Article Title: Pleiotropic Effects of Metformin on the Chemotherapy Response of HPV-Positive Cancer Cells.
Article Snippet: See the T erm s and C onditions (https://onlinelibrary.w iley.com /term s-and-conditions) on W iley O nline L ibrary for rules of use; O A articles are governed by the applicable C reative C om m ons L icense Cancer Research Center, Heidelberg, Germany); anti‐B‐MYB (LX015.1, from Dr. Roger Watson) [43]; anti‐BID (#2002), anti‐ cleaved Caspase‐9 (#7237), anti‐cleaved poly(ADP‐ribose) polymerase (PARP) (#9546), anti‐FOXM1 (D3F2B, #20549), anti‐ acetyl‐p53 (K382) (#2525), anti‐phospho‐p53 (S15) (#9284), anti‐ p130 (D9T7M, #13610), anti‐pRb (#9309), anti‐phospho‐pRb (S807/811) (#9308), all from Cell Signaling Technology; anti‐ CKS1 (36‐6800), from Invitrogen, Thermo Fisher Scientific; anti‐β‐ Actin (C4, sc‐47778), anti‐CDC2 (B‐6, sc‐8395), anti‐CDK2 (D‐12, sc‐6248), anti‐Cyclin A (H‐432, sc‐751), anti‐Cyclin B2 (A‐2, sc‐ 28303), anti‐Cyclin D1 (DCS‐6, sc‐20044), anti‐E2F1 (KH95, sc‐ 251), anti‐glyceraldehyde 3‐phosphate dehydrogenase (GAPDH) (FL‐335, sc‐25778), anti‐p21 (SX118, sc‐53870), anti‐p53 (DO‐1, sc‐ 126), anti‐PCNA (PC10, sc‐56), anti‐PLK1 (F‐8, sc‐17783), anti‐ RRM1 (R1 [A‐10], sc‐377415), anti‐RRM2 (R2 [A‐5], sc‐398294), all from Santa Cruz Biotechnology; anti‐Cyclin B1 (05‐373, clone GNS3 [8A5D12]), from Upstate; anti‐E6AP (E8655, clone E6AP‐ 300), from Sigma‐Aldrich.
Article Title: The scaffold protein IQGAP1 links heat-induced stress signals to alternative splicing regulation in gastric cancer cells
Article Snippet: Protein A/G Plus Agarose Beads were purchased from Santa-Cruz Biotechnology (sc-2003) The following antibodies were used: anti-hnRNPM, clone 1D8 (Santa Cruz Biotechnology, Cat# sc-20002; or NB200-314SS, Novus); anti-IQGAP1 (clone H109 Santa Cruz Biotechnology, Cat# sc-10792; RRID:AB_2249072; clone D-3, Santa Cruz, Cat# sc-374307; clone C-9, Santa Cruz, Cat# sc-379021; Proteintech, Cat# 22167-1-AP); anti-Beta-actin (clone 7D2C10, ProteinTech, Cat# 60008-1-Ig); anti-Lamin B1 (clone A-11, Santa Cruz Cat#sc-377000); anti-GAPDH (ProteinTech, Cat#60004-1-Ig); anti-hnRNP A2/B1 (clone DP3B3, Santa Cruz Cat#sc-32316); anti-hnRNP A1 (clone 4B10, Santa-Cruz Biotechnology, Cat# sc-32301); anti-hnRNPL (clone 4D11, Santa-Cruz Biotechnology Cat# sc-46673); anti-hnRNP C1/C2 (clone 4F4, Santa-Cruz Biotechnology, Cat#sc-32308); anti-RNA Helicase A (Abcam Cat# ab26271); anti-hnRNP K/J (clone 3C2, Santa-Cruz Biotechnology Cat# sc-32307); anti-SF3B3 (clone B-4, Santa Cruz, Cat# sc-398670); anti-beta tubulin (clone 2-28-33, Sigma-Aldrich, Cat# T5293); anti-TPX2 (clone E-2, Santa-Cruz Biotechnology, Cat# sc-271570); anti-RRM2 (clone A-15, Santa-Cruz Biotechnology, Cat# sc-398294); anti-SAFB (F-3, Santa Cruz, Cat# sc-393403); anti-Matrin3 (Santa-Cruz Biotechnology, Cat#2539a); anti-Histone H3 (ProteinTech, Cat#17168-1-AP); anti-CPSF6 (clone H-59, Santa-Cruz Biotechnology, Cat#sc-292170); anti-NF90 (clone A-3, Santa-Cruz Biotechnology, Cat#sc-377406); anti-Anillin (CL0303, Abcam, Cat# ab211872); anti-FZR, (clone DSC-266, Santa-Cruz Biotechnology, Cat# sc-56312); anti-TK1 (EPR3193, Abcam, Cat# ab76495); anti-ANAPC10 (clone B-1, Santa-Cruz Biotechnology, Cat# sc-166790); anti Ki67 (clone SolA15, ThermoFisher, Cat# 14-5698-82); HRP-conjugated goat anti-rabbit (SouthernBiotech, Cat# 4050-05); HRP-conjugated goat anti-mouse IgG (SouthernBiotech, Cat# 1030-05); Anti-rabbit-Alexa Fluor 555 (Molecular Probes, Cat# A27039); Anti-mouse Alexa Fluor 488 (Molecular Probes Cat# A28175); Anti-mouse Alexa Fluor 647 (Invitrogen, Cat#A21235).
Article Title: Pleiotropic Effects of Metformin on the Chemotherapy Response of HPV‐Positive Cancer Cells
Article Snippet: The following primary antibodies were used: anti‐HPV18 E6 (AVC 399) and anti‐HPV16 E6 (AVC 843, kind gifts from Dr. Johannes Schweizer, Arbor Vita Corporation, Fremont, CA, USA); anti‐HPV18 E7 (E7C) [ ]; anti‐HPV16 E7 (NM2, kind gift from Dr. Martin Müller, German Cancer Research Center, Heidelberg, Germany); anti‐B‐MYB (LX015.1, from Dr. Roger Watson) [ ]; anti‐BID (#2002), anti‐cleaved Caspase‐9 (#7237), anti‐cleaved poly(ADP‐ribose) polymerase (PARP) (#9546), anti‐FOXM1 (D3F2B, #20549), anti‐acetyl‐p53 (K382) (#2525), anti‐phospho‐p53 (S15) (#9284), anti‐p130 (D9T7M, #13610), anti‐pRb (#9309), anti‐phospho‐pRb (S807/811) (#9308), all from Cell Signaling Technology; anti‐CKS1 (36‐6800), from Invitrogen, Thermo Fisher Scientific; anti‐β‐Actin (C4, sc‐47778), anti‐CDC2 (B‐6, sc‐8395), anti‐CDK2 (D‐12, sc‐6248), anti‐Cyclin A (H‐432, sc‐751), anti‐Cyclin B2 (A‐2, sc‐28303), anti‐Cyclin D1 (DCS‐6, sc‐20044), anti‐E2F1 (KH95, sc‐251), anti‐glyceraldehyde 3‐phosphate dehydrogenase (GAPDH) (FL‐335, sc‐25778), anti‐p21 (SX118, sc‐53870), anti‐p53 (DO‐1, sc‐126), anti‐PCNA (PC10, sc‐56), anti‐PLK1 (F‐8, sc‐17783), anti‐RRM1 (R1 [A‐10], sc‐377415), anti‐RRM2 (R2 [A‐5], sc‐398294), all from Santa Cruz Biotechnology; anti‐Cyclin B1 (05‐373, clone GNS3 [8A5D12]), from Upstate; anti‐E6AP (E8655, clone E6AP‐300), from Sigma‐Aldrich.
Western Blot:Article Title: Osteoblast-derived osteomodulin restrains osteoclastogenesis via ITGB8/RRM2-mediated reduction of mitochondrial respiration and mitochondrial ATP production
Article Snippet: Protein bands were visualized using the Amersham Imager 600 (GE) and quantified using ImageJ. .. Western blotting (WB) was performed with the following antibodies: anti-GAPDH (1:10,000, 60004-1-IG; Proteintech), anti-β-actin (1:10,000, 66009-1-IG; Proteintech), anti-cathepsin K (CTSK) (1:100, sc-48353; Santa Cruz), anti-NFATC1 (1:100, sc-7294; Santa Cruz), anti-matrix metallopeptidase 9 (MMP9) (1:1,000, 10375-2-AP; Proteintech), anti-RRM2 (1:100, sc-81850; Santa Cruz), anti-ITGB8 (1:1,000, 29775-1-AP; Proteintech), anti-OMD (1:1,000, ab154249; Abcam), anti-RUNX2 (1:1,000, 20700-1-AP; Proteintech), anti-collagen type I (1:1,000, 14695-1-AP; Proteintech), anti-ATP Synthase F1 Subunit Alpha (ATP5A1) (1:10,000, 14676-1-AP; Proteintech), anti-ubiquinol-cytochrome c reductase core protein 2 (UQCRC2) (1:10,000, 67547-1-Ig; Proteintech), anti-succinate dehydrogenase subunits B (SDHB) (1:10,000, 10620-1-AP; Proteintech), anti-cytochrome oxidase subunit IV (MTCO4) (1:1,000, 11242-1-AP; Proteintech), anti-NADH-ubiquinone oxidoreductase ASHI subunit (NDUFB8) (1:10,000, 14794-1-AP; Proteintech), anti-FLAG (1:10,000, 20543-1-AP; Proteintech), anti-HA (1:10,000, 51064-2-AP; Proteintech), anti-YAP (1:1,000, ET1608-30; HUABIO), anti-p-YAP (S127) (1:1,000, ET1611–69; HUABIO), anti-Smad2 (1:1,000, ET1604-22; HUABIO), anti-p-Smad2 (1:5,000, ET1612-32; HUABIO), anti-Smad3 (1:5,000, ET1607-41; HUABIO), anti-p-Smad3 (1:2,000, ET1609-41; HUABIO), anti-AKT (1:1,000, #9272, Cell Signaling Technology), anti-p-AKT (1:2,000, #4060, Cell Signaling Technology), anti-ERK (1:1,000, #9102, Cell Signaling Technology), anti-p-ERK (1:1,000, #4695, Cell Signaling Technology), anti-p38 (1:1,000, #9212, Cell Signaling Technology), anti-p-p38 (1:1,000, #4511, Cell Signaling Technology), anti-JNK (1:5,000, 51153-1-AP; Proteintech) and anti-p-JNK (1:1,000, 80024-1-RR; Proteintech). ..
Article Title: Osteoblast-derived osteomodulin restrains osteoclastogenesis via ITGB8/RRM2-mediated reduction of mitochondrial respiration and mitochondrial ATP production.
Article Snippet: Protein bands were visualized using the Amersham Imager 600 (GE) and quantified using ImageJ. .. Western blotting (WB) was performed with the following antibodies: anti-GAPDH (1:10,000, 60004-1-IG; Proteintech), anti-β-actin (1:10,000, 66009-1-IG; Proteintech), anti-cathepsin K (CTSK) (1:100, sc-48353; Santa Cruz), anti-NFATC1 (1:100, sc-7294; Santa Cruz), anti-matrix metallopeptidase 9 (MMP9) (1:1,000, 10375-2-AP; Proteintech), anti-RRM2 (1:100, sc-81850; Santa Cruz), anti-ITGB8 (1:1,000, 29775-1-AP; Proteintech), anti-OMD (1:1,000, ab154249; Abcam), antiRUNX2 (1:1,000, 20700-1-AP; Proteintech), anti-collagen type I (1:1,000, 14695-1-AP; Proteintech), anti-ATP Synthase F1 Subunit Alpha (ATP5A1) (1:10,000, 14676-1-AP; Proteintech), anti-ubiquinol-cytochrome c reductase core protein 2 (UQCRC2) (1:10,000, 67547-1-Ig; Proteintech), anti-succinate dehydrogenase subunits B (SDHB) (1:10,000, 10620-1-AP; Proteintech), anti-cytochrome oxidase subunit IV (MTCO4) (1:1,000, 11242-1-AP; Proteintech), anti-NADH-ubiquinone oxidoreductase ASHI subunit (NDUFB8) (1:10,000, 14794-1-AP; Proteintech), anti-FLAG (1:10,000, 20543- 1-AP; Proteintech), anti-HA (1:10,000, 51064-2-AP; Proteintech), anti-YAP (1:1,000, ET1608-30; HUABIO), anti-p-YAP (S127) (1:1,000, ET1611–69; HUABIO), anti-Smad2 (1:1,000, ET1604-22; HUABIO), anti-p-Smad2 (1:5,000, ET1612-32; HUABIO), anti-Smad3 (1:5,000, ET1607-41; HUABIO), anti-p-Smad3 (1:2,000, ET1609-41; HUABIO), anti-AKT (1:1,000, #9272, Cell Signaling Technology), anti-p-AKT (1:2,000, #4060, Cell Signaling Technology), anti-ERK (1:1,000, #9102, Cell Signaling Technology), anti-p-ERK (1:1,000, #4695, Cell Signaling Technology), anti-p38 (1:1,000, #9212, Cell Signaling Technology), anti-p-p38 (1:1,000, #4511, Cell Signaling Technology), anti-JNK (1:5,000, 51153-1-AP; Proteintech) and anti-p-JNK (1:1,000, 80024-1-RR; Proteintech). ..
Article Title: MS CETSA deep functional proteomics uncovers DNA repair programs leading to gemcitabine resistance
Article Snippet: .. For protein detection with western blot, the following antibodies were used: Santa Cruz Biotechnology: anti-RRM2 (sc-81850), anti-GMNN (sc-74456), anti-PCNA (sc-56), anti-PARP1 (sc-8007), anti-PolK (sc-166667), anti-PolH (sc-17770), anti-PolI (sc-101026), anti-Rev1 (sc-393022), anti-beta actin (sc-69879), anti-goat IgG HRPconjugated secondary antibody (sc-2354). .. Invitrogen: anti-SLBP (PA5-53966), anti-FBXO5 (37-6600), anti-DTL (PA5-88380), antirabbit IgG HRP-conjugated secondary antibody (31460), anti-mouse IgG HRP-conjugated secondary antibody (31430).
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